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Showing 22 publications

YearPublicationVenueTypeCitationsLinks
2026A framework for a Standard-Enabled FAIR data Management workflow for synthetic biologyC Vitalis, G Vidal, SP Samineni, P Fontanarrosa, CJ MyersACS Synthetic Biology 15 (1), 1-8journal article
2026SBOL converter: enabling backward compatibility for biological designsM Ünal, CJ Myers, IT Medeni, J Beal, P Vaidyanathan, L Buecherl, ...Journal of integrative bioinformatics, 20260005journal article
2025A decade of SBOL Visual: growing adoption of a diagram standard for engineering biologyL Buecherl, FX Buson, GH Sørensen, C Vitalis, E Kubaczka, G Vidal, ...ACS synthetic biology 14 (10), 3822-3830journal article
2024Genetic network design automation with loicaG Vidal, C Vitalis, T Matúte, I Núñez, F Federici, TJ RudgeSynthetic Biology: Methods and Protocols, 393-412book chapter
2024OPA1 and disease-causing mutants perturb mitochondrial nucleoid distributionJ Macuada, I Molina-Riquelme, G Vidal, N Pérez-Bravo, ...Cell Death & Disease 15 (11), 870journal article
2024Standardized golden gate assembly metadata representation using SBOLG Vidal, C Vitalis, J GuillénGolden Gate Cloning: Methods and Protocols, 89-104book chapter
2023Experimental data connector (XDC): integrating the capture of experimental data and metadata using standard formats and digital repositoriesSP Samineni, G Vidal, C Vitalis, GY Feliu, TJ Rudge, CJ Myers, J ManteACS Synthetic Biology 12 (4), 1364-1370journal article
2023Functional synthetic biologyI Aldulijan, J Beal, S Billerbeck, J Bouffard, G Chambonnier, N Ntelkis, ...Synthetic Biology 8 (1), ysad006journal article
2023Standardized representation of parts and assembly for build planningJ Beal, V Selvarajah, G Chambonnier, T Haddock, A Vignoni, G Vidal, ...ACS synthetic biology 12 (12), 3646-3655journal article
2023Synthetic biology open language (SBOL) version 3.1. 0L Buecherl, T Mitchell, J Scott-Brown, P Vaidyanathan, G Vidal, H Baig, ...Journal of integrative bioinformatics 20 (1), 20220058journal article
2022Accurate characterization of dynamic microbial gene expression and growth rate profilesG Vidal, C Vitalis, M Muñoz Silva, C Castillo-Passi, G Yáñez Feliú, ...Synthetic Biology 7 (1), ysac020journal article
2022LOICA: Integrating models with data for genetic network design automationG Vidal, C Vitalis, TJ RudgeACS Synthetic Biology 11 (5), 1984-1990journal article
2022Mitochondrial nucleoid dynamics perturbation by OPA1 disease-causing mutantsV Eisner, J Macuada, G Vidal, G Aedo, B Cartes-Saavedra, T RudgeBiophysical Journal 121 (3), 5ajournal article
2022OPA1 disease-causing mutants perturb mitochondrial nucleoid cluster distributionV Eisner, J Macuada, G Vidal, I Molina-Riquelme, G Aedo, D Lagos, ...Elsevierother
2022Phase-based genetic logic circuitsTJ Rudge, G VidalbioRxiv, 2022.12. 13.520289preprint
2021Flapjack: Data management and analysis for genetic circuit characterizationG Yanez Feliu, B Earle Gomez, V Codoceo Berrocal, M Munoz Silva, ...ACS Synthetic Biology 10 (1), 183-191journal article
2021Role of OPA1 ADOA-Causing Mutants in Mitochondrial Nucleoid DistributionJ Macuada, G Aedo, G Vidal, T Rudge, B Cartes-Saavedra, V EisnerBiophysical Journal 120 (3), 349ajournal article
2021Semi-Automated Method for Image Analysis of mtDNA Nucleoids DynamicsG Aedo, J Macuada, B Cartes-Saavedra, G Vidal, T Rudge, V EisnerBiophysical Journal 120 (3), 349ajournal article
2020Novel tunable spatio-temporal patterns from a simple genetic oscillator circuitG Yáñez Feliú, G Vidal, M Muñoz Silva, TJ RudgeFrontiers in bioengineering and biotechnology 8, 893other
2018Corchea: paper-based microfluidic deviceG Vidal, T RudgeVenue not listedother
2018Emergence of Travelling Waves from a Synthetic Oscillatory Gene NetworkGY Feliú, G Vidal, M Muñoz, S Figueroa, TJ RudgeVenue not listedother
2016Glucagon-like peptide-1 inhibits vascular smooth muscle cell dedifferentiation through mitochondrial dynamics regulationG Torres, PE Morales, M García-Miguel, I Norambuena-Soto, ...Biochemical pharmacology 104, 52-61journal article